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Tutorials

  • Introduction to 16S Metabarcoding
    • Introduction to the Microbiome
    • Setup
    • Quality Control
    • Error Model & ASVs
    • Merging, Chimeras & Taxonomy
    • Diversity Analysis
    • Differential Abundance
  • Introduction to ChIP-Seq
  • Introduction to RNAseq
  • Introduction to scRNAseq

Bioinformatics applications

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  • Diamond
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  • Fastp
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  • Minipolish
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  • Rmats2sashimiplot
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Tufts HPC Bioinformatics
  • Introduction to 16S Metabarcoding
  • Edit on GitHub

Introduction to 16S Metabarcoding

Sections:

  • Introduction to the Microbiome
  • Setup
  • Quality Control
  • Error Model & ASVs
  • Merging, Chimeras & Taxonomy
  • Diversity Analysis
  • Differential Abundance
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